这篇文章主要讲解了“安装picrust2保存报错怎么解决”，文中的讲解内容简单清晰，易于学习与理解，下面请大家跟着小编的思路慢慢深入，一起来研究和学习“安装picrust2保存报错怎么解决”吧！
安装picrust2 保存：pkg_resources.DistributionNotFound: The 'cython' distribution was not found and is required by biom-format
安装方法：
All installation instructions are in more detail here.
First, clone the repository and enter the directory:
git clone https://github.com/picrust/picrust2.git
cd
Next, install the required dependencies listed here.
Install PICRUSt2 into it's own environment using conda:
conda env create -f picrust2-env.yaml
source activate picrust2
pip install --no-deps --editable .
Finally, run the tests to verify the install was successful:
pytest
测试报错：
Standard error of the above failed command:
Traceback (most recent call last):
File "/share/work/biosoft/conda/Miniconda3.8/envs/picrust2/bin/picrust2_pipeline.py", line 4, in <module>
__import__('pkg_resources').require('PICRUSt2==2.3.0b0')
File "/share/work/biosoft/conda/Miniconda3.8/envs/picrust2/lib/python3.6/site-packages/pkg_resources/__init__.py", line 3267, in <module>
@_call_aside
File "/share/work/biosoft/conda/Miniconda3.8/envs/picrust2/lib/python3.6/site-packages/pkg_resources/__init__.py", line 3251, in _call_aside
f(*args, **kwargs)
File "/share/work/biosoft/conda/Miniconda3.8/envs/picrust2/lib/python3.6/site-packages/pkg_resources/__init__.py", line 3280, in _initialize_master_working_set
working_set = WorkingSet._build_master()
File "/share/work/biosoft/conda/Miniconda3.8/envs/picrust2/lib/python3.6/site-packages/pkg_resources/__init__.py", line 582, in _build_master
ws.require(__requires__)
File "/share/work/biosoft/conda/Miniconda3.8/envs/picrust2/lib/python3.6/site-packages/pkg_resources/__init__.py", line 899, in require
needed = self.resolve(parse_requirements(requirements))
File "/share/work/biosoft/conda/Miniconda3.8/envs/picrust2/lib/python3.6/site-packages/pkg_resources/__init__.py", line 785, in resolve
raise DistributionNotFound(req, requirers)
pkg_resources.DistributionNotFound: The 'cython' distribution was not found and is required by biom-format
解决办法:
重新安装：pip install biom-format
感谢各位的阅读，以上就是“安装picrust2保存报错怎么解决”的内容了，经过本文的学习后，相信大家对安装picrust2保存报错怎么解决这一问题有了更深刻的体会，具体使用情况还需要大家实践验证。这里是天达云，小编将为大家推送更多相关知识点的文章，欢迎关注！